Initiatives

Research Priority Systems Biology Host-Microbiome Interactions: https://systemsbiology.amsterdam/

Holomicrobiome: https://holomicrobioom.nl/en/home-en/

Society

Dutch Royal Society of Microbiology: https://www.knvm.org/home

American Society for Microbiology: https://asm.org/

American Chemical Society: https://www.acs.org/

Core facility

Proteomic and metabolomic core facility: https://sils.uva.nl/content/research-groups/mass-spectrometry-of-biomolecules/mass-spectrometry-of-biomolecules.html

MAD: Dutch Genomics Service & Support Provider:http://www.dutchgenomics.nl/employees.html

Single cell/nuclei sequencing: https://www.amsterdamumc.org/en/research/core-facility/genomics/techniques/single-cellnuclei-sequencing-1.htm

Microscopy and Cytometry Core Facility: https://immunologyamsterdam.org/core-facilities/

Van Leeuwenhoek Centre for Advanced Microscopy: http://www.lcam-fnwi.nl/

Sanquin Bloedproducten voor onderzoek: https://www.sanquin.org/nl/producten-en-diensten/bloed-producten/voor-onderzoek/index

Microbiome

Disbiome database: https://disbiome.ugent.be/home

Transcriptome and metatranscriptome database: https://ibd-meta-analysis.herokuapp.com/

MICA: http://microbiotacenter.nl/

Microbiology

BioCyc Genome database collection: https://biocyc.org/

Bacterial diversity database: https://bacdive.dsmz.de/

DSMZ: https://www.dsmz.de/

Data analysis

MaxQuant: https://www.maxquant.org/

MetaboAnalyst: https://www.metaboanalyst.ca/

GSEA: https://www.gsea-msigdb.org/gsea/index.jsp

Statistics for Biologists: https://www.nature.com/collections/qghhqm/pointsofsignificance

Transferrable skills

Writing center at University of Amsterdam: https://intt.uva.nl/language-training/writing-centre/writing-centre.html